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Epic Code LAB1230021 Amyloid Protein Identification, Paraffin, Mass Spectrometry

Additional Codes

Mayo Code: AMPIP

Performing Laboratory

Mayo Clinic Laboratories in Rochester

Useful For

Definitive identification of amyloid proteins

Specimen Type

AMYLOID


Ordering Guidance


This test should only be ordered on patients for whom a primary diagnosis has already been established. If a patient does not have a primary diagnosis, order PATHC / Pathology Consultation or refer to the Pathology Consultation Ordering Algorithm.

 

If a pathology consultation is desired in addition to this test, order PATHC / Pathology Consultation alone and send the required paperwork with specimen. Indicate that amyloid protein identification is desired. If needed, this test will be added by the reviewing pathologist and will be reported with the consultation. For more information see PATHC / Pathology Consultation.



Shipping Instructions


Attach the green pathology address label included in the kit to the outside of the transport container.



Necessary Information


1. Preliminary pathology report and history are required.

2. Include performed Congo red slide

3. A brief explanatory note or consultative letter is also recommended.



Specimen Required


Specimen Type: Formalin-fixed or B5-fixed paraffin-embedded tissue block

Collection Instructions:

1. Do not send fixed tissue slides for testing. Testing can only be done on paraffin-embedded tissue blocks.

2. If a Congo red stain has already been performed, send stained slide along with the tissue block.


Specimen Stability Information

Specimen Type Temperature Time Special Container
AMYLOID Ambient (preferred)
  Refrigerated 

Reject Due To

Fixed tissue slides
Wet/frozen tissue
Cytological smears
Nonformalin fixed tissue
Nonparaffin embedded tissue
Reject

Day(s) Performed

Monday through Friday

Reference Values

An interpretive report will be provided.

Clinical Information

Amyloidosis is a group of hereditary and acquired diseases unified by extracellular tissue deposition of misfolded proteins resulting in end organ damage. Amyloidosis can be a systemic or localized disease. Although many cases of amyloidosis are hereditary, most are acquired as the result of an underlying monoclonal B-cell/plasma cell malignancy, as a phenomenon of aging, or as the result of long-standing chronic inflammation. Specific amyloid-related diseases are therefore associated with specific amyloid proteins. These include kappa or lambda immunoglobulin light chains (AL amyloid), transthyretin (ATTR amyloid), serum amyloid A (SAA amyloid), and other uncommon subtypes. Because treatment of amyloidosis patients differs radically for the different amyloid subtypes, it is critically important to accurately identify the proteins that constitute the amyloid deposits.

 

The basic diagnosis of amyloidosis is typically achieved by Congo red staining of paraffin-embedded tissue biopsy specimens obtained from diverse anatomic sites and demonstrating Congo red-positive, apple-green birefringent, amyloid deposits in the tissues. The next step is to definitively subtype the amyloid deposits. This test fulfills that need. It relies on laser microdissection of Congo red-positive amyloid deposits followed by analysis by liquid chromatography tandem mass spectrometry to accurately determine the identity of the proteins that constitute the amyloid.

Cautions

In rare instances amyloid deposits may show a false-negative result by Congo red staining. Because this test depends on the presence of Congo red-positive amyloid, these cases may not be identified as amyloid by this testing algorithm. Correlation with clinical and pathologic features and other laboratory test results is recommended to definitively exclude a diagnosis of amyloidosis.

Interpretation

An interpretation will be provided.

Reporting Name

Amyloid Protein ID, Par, LC MS/MS

Method Name

Histological Stain/Liquid Chromatography Tandem Mass Spectrometry (LC-MS/MS)

Method Description

Affected areas are removed from paraffin-embedded tissues by laser microdissection. Protein digestion is performed, followed by liquid chromatography tandem mass spectrometry.(Unpublished Mayo method)

CPT Code Information

88313

82542 (if appropriate)

88380 (if appropriate)

LOINC Code Information

Test ID Test Order Name Order LOINC Value
AMPIP Amyloid Protein ID, Par, LC MS/MS 101405-9

 

Result ID Test Result Name Result LOINC Value
71185 Interpretation 50595-8
71186 Participated in the Interpretation No LOINC Needed
71187 Report electronically signed by 19139-5
71189 Material Received 81178-6
71592 Disclaimer 62364-5
72109 Case Number 80398-1

Report Available

7 to 15 days

Test Classification

This test was developed and its performance characteristics determined by Mayo Clinic in a manner consistent with CLIA requirements. It has not been cleared or approved by the US Food and Drug Administration.

Clinical Reference

1. Theis JD, Dasari S, Vrana JA, Kurtin PJ, Dogan A. Shotgun-proteomics-based clinical testing for diagnosis and classification of amyloidosis. J Mass Spectrom. 2013;48(10):1067-1077

2. Said SM, Sethi S, Valeri AM, et al. Renal amyloidosis: origin and clinicopathologic correlations of 474 recent cases. Clin J Am Soc Nephrol. 2013;8(9):1515-1523

3. Dasari S, Theis JD, Vrana JA, et al. Amyloid typing by mass spectrometry in clinical practice: a comprehensive review of 16,175 samples. Mayo Clin Proc. 2020;95(9):1852-1864. doi:10.1016/j.mayocp.2020.06.029

4. Klein CJ, Vrana JA, Theis JD, et al. Mass spectrometric-based proteomic analysis of amyloid neuropathy type in nerve tissue. Arch Neurol. 2011;68(2):195-199

5. Vrana JA, Gamez JD, Madden BJ, Theis JD, Bergen HR III, Dogan A. Classification of amyloidosis by laser microdissection and mass spectrometry-based proteomic analysis in clinical biopsy specimens. Blood. 2009;114(24):4957-4959

Reflex Tests

Test ID Reporting Name Available Separately Always Performed
MLCPC Microdissection, Laser Capture No, (Bill Only) No
MSPTC Mass Spectrometry No, (Bill Only) No

Forms

If not ordering electronically, complete, print, and send 1 of the following forms with the specimen:

-Cardiovascular Test Request (T724)

-Hematopathology/Cytogenetics Test Request (T726)

-Renal Diagnostics Test Request (T830)